dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01910
Location and strand information: 1951991 - 1952653 (-)
Family: 9.B.143.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01911
Location and strand information: 1952673 - 1954013 (-)
Family: 2.A.40.2.1
Protein type: TC
Protein description: Xanthine permease XanP

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01912
Location and strand information: 1954063 - 1957716 (-)
Family: null
Protein type: null
Protein description: DNA-directed RNA polymerase subunit beta'

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01913
Location and strand information: 1957731 - 1961561 (-)
Family: null
Protein type: null
Protein description: DNA-directed RNA polymerase subunit beta

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01914
Location and strand information: 1961792 - 1967779 (-)
Family: CBM51|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.5696
Protein molecular weight: 222737.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01915
Location and strand information: 1967989 - 1968939 (-)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01916
Location and strand information: 1968942 - 1969940 (-)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01917
Location and strand information: 1969947 - 1970948 (-)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Oligopeptide transport system permease protein OppC

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01918
Location and strand information: 1970953 - 1971906 (-)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Dipeptide transport system permease protein DppB

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01919
Location and strand information: 1972162 - 1973814 (-)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Oligopeptide-binding protein OppA

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01920
Location and strand information: 1974116 - 1974493 (-)
Family: null
Protein type: null
Protein description: 50S ribosomal protein L7/L12

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01921
Location and strand information: 1974537 - 1975073 (-)
Family: null
Protein type: null
Protein description: 50S ribosomal protein L10

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01922
Location and strand information: 1975409 - 1976815 (+)
Family: 2.A.25.1.5
Protein type: TC
Protein description: Amino-acid carrier protein AlsT

Gene clsuter ID: MGYG000001373_1|CGC18
Gene ID: MGYG000001373_01923
Location and strand information: 1976960 - 1977649 (-)
Family: 1.C.82.1.1
Protein type: TC
Protein description: 50S ribosomal protein L1

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is alpha-galactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001373_01910	hypothetical protein	TC	1951991	1952653	-	9.B.143.2.3
MGYG000001373_01911	Xanthine permease XanP	TC	1952673	1954013	-	2.A.40.2.1
MGYG000001373_01912	DNA-directed RNA polymerase subunit beta'	null	1954063	1957716	-	RNA_pol_Rpb1_1\| RNA_pol_Rpb1_2\| RNA_pol_Rpb1_3\| RNA_pol_Rpb1_4\| RNA_pol_Rpb1_5
MGYG000001373_01913	DNA-directed RNA polymerase subunit beta	null	1957731	1961561	-	RNA_pol_Rpb2_1\| RNA_pol_Rpb2_2\| RNA_pol_Rpb2_2\| RNA_pol_Rpb2_3\| RNA_pol_Rpb2_45\| RNA_pol_Rpb2_6\| RNA_pol_Rpb2_7
MGYG000001373_01914	Beta-galactosidase	CAZyme	1961792	1967779	-	CBM51\| GH2
MGYG000001373_01915	Oligopeptide transport ATP-binding protein OppF	TC	1967989	1968939	-	3.A.1.5.20
MGYG000001373_01916	Oligopeptide transport ATP-binding protein OppD	TC	1968942	1969940	-	3.A.1.5.2
MGYG000001373_01917	Oligopeptide transport system permease protein OppC	TC	1969947	1970948	-	3.A.1.5.2
MGYG000001373_01918	Dipeptide transport system permease protein DppB	TC	1970953	1971906	-	3.A.1.5.2
MGYG000001373_01919	Oligopeptide-binding protein OppA	TC	1972162	1973814	-	3.A.1.5.19
MGYG000001373_01920	50S ribosomal protein L7/L12	null	1974116	1974493	-	Ribosomal_L12_N\| Ribosomal_L12
MGYG000001373_01921	50S ribosomal protein L10	null	1974537	1975073	-	Ribosomal_L10
MGYG000001373_01922	Amino-acid carrier protein AlsT	TC	1975409	1976815	+	2.A.25.1.5
MGYG000001373_01923	50S ribosomal protein L1	TC	1976960	1977649	-	1.C.82.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature